{
  "_id": "6a1cc3951d7bb097a0a349ba",
  "Package": "BayesMultiMode",
  "Type": "Package",
  "Title": "Bayesian Mode Inference",
  "Version": "1.0.0",
  "Authors@R": "c(person(given = \"Nalan\", family = \"Baştürk\", role = \"aut\"),\nperson(given = \"Jamie\", family = \"Cross\", role = \"aut\"),\nperson(given = \"Peter\", family = \"de Knijff\", role = \"aut\"),\nperson(given = \"Lennart\", family = \"Hoogerheide\", role = \"aut\"),\nperson(given = \"Paul\", family = \"Labonne\", email= \"labonnepaul@gmail.com\", role = c(\"aut\", \"cre\")),\nperson(given = \"Herman\", family = \"van Dijk\", role = \"aut\"))",
  "Description": "A two-step Bayesian approach for mode inference (Baştürk\net al., 2026) <doi:10.18637/jss.v116.i03>. First, a mixture\ndistribution is fitted on the data using a sparse finite\nmixture (SFM) Markov chain Monte Carlo (MCMC) algorithm. The\nnumber of mixture components does not have to be known; the\nsize of the mixture is estimated endogenously through the SFM\napproach. Second, the modes of the estimated mixture at each\nMCMC draw are retrieved using algorithms specifically tailored\nfor mode detection. These estimates are then used to construct\nposterior probabilities for the number of modes, their\nlocations and uncertainties, providing a powerful tool for mode\ninference.",
  "License": "GPL (>= 3)",
  "RdMacros": "Rdpack",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "URL": "https://github.com/paullabonne/BayesMultiMode",
  "BugReports": "https://github.com/paullabonne/BayesMultiMode/issues",
  "NeedsCompilation": "no",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.3",
  "Config/testthat/edition": "3",
  "Config/pak/sysreqs": "cmake make libicu-dev",
  "Repository": "https://paullabonne.r-universe.dev",
  "Date/Publication": "2026-05-31 22:50:49 UTC",
  "RemoteUrl": "https://github.com/paullabonne/bayesmultimode",
  "RemoteRef": "HEAD",
  "RemoteSha": "68841192e427c7270049a53d703837f2128a155f",
  "Packaged": {
    "Date": "2026-05-31 23:21:41 UTC",
    "User": "root"
  },
  "Author": "Nalan Baştürk [aut],\nJamie Cross [aut],\nPeter de Knijff [aut],\nLennart Hoogerheide [aut],\nPaul Labonne [aut, cre],\nHerman van Dijk [aut]",
  "Maintainer": "Paul Labonne <labonnepaul@gmail.com>",
  "MD5sum": "797f6e1a54e087f1b5bd098ce7bc3393",
  "_user": "paullabonne",
  "_type": "src",
  "_file": "BayesMultiMode_1.0.0.tar.gz",
  "_fileid": "fb372e1b326bd4feb00b2c6d4e0afd879d568a7da2369482b9cbcca9177ea459",
  "_filesize": 5293043,
  "_sha256": "fb372e1b326bd4feb00b2c6d4e0afd879d568a7da2369482b9cbcca9177ea459",
  "_created": "2026-05-31T23:21:41.000Z",
  "_published": "2026-05-31T23:26:13.609Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78765064898,
      "time": 208,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7320935095"
    },
    {
      "job": 78765064887,
      "time": 216,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7320935846"
    },
    {
      "job": 78765064904,
      "time": 125,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7320926577"
    },
    {
      "job": 78765064891,
      "time": 152,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7320929487"
    },
    {
      "job": 78764859026,
      "time": 216,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7320914198"
    },
    {
      "job": 78765064909,
      "time": 144,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7320928519"
    },
    {
      "job": 78765064911,
      "time": 234,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7320937573"
    },
    {
      "job": 78765064915,
      "time": 137,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7320927721"
    },
    {
      "job": 78765064906,
      "time": 128,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7320926821"
    }
  ],
  "_buildurl": "https://github.com/r-universe/paullabonne/actions/runs/26727369261",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/paullabonne/bayesmultimode",
  "_commit": {
    "id": "68841192e427c7270049a53d703837f2128a155f",
    "author": "Paul Labonne <paul.labonne@bankofengland.co.uk>",
    "committer": "Paul Labonne <paul.labonne@bankofengland.co.uk>",
    "message": "Merge branch 'main' of https://github.com/paullabonne/BayesMultiMode\n",
    "time": 1780267849
  },
  "_maintainer": {
    "name": "Paul Labonne",
    "email": "labonnepaul@gmail.com",
    "login": "paullabonne",
    "description": "",
    "uuid": 89748060
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "assertthat",
      "role": "Imports"
    },
    {
      "package": "bayesplot",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "version": ">= 3.4.0",
      "role": "Imports"
    },
    {
      "package": "ggpubr",
      "role": "Imports"
    },
    {
      "package": "gtools",
      "role": "Imports"
    },
    {
      "package": "magrittr",
      "role": "Imports"
    },
    {
      "package": "MCMCglmm",
      "role": "Imports"
    },
    {
      "package": "mvtnorm",
      "role": "Imports"
    },
    {
      "package": "posterior",
      "role": "Imports"
    },
    {
      "package": "sn",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "Rdpack",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "paullabonne",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-37",
      "n": 1
    },
    {
      "week": "2025-39",
      "n": 3
    },
    {
      "week": "2026-06",
      "n": 3
    },
    {
      "week": "2026-22",
      "n": 2
    }
  ],
  "_tags": [],
  "_stars": 2,
  "_contributors": [
    {
      "user": "paullabonne",
      "count": 356,
      "uuid": 89748060
    },
    {
      "user": "teunbrand",
      "count": 2,
      "uuid": 49372158
    }
  ],
  "_userbio": {
    "uuid": 89748060,
    "type": "user",
    "name": "Paul Labonne"
  },
  "_downloads": {
    "count": 259,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/BayesMultiMode"
  },
  "_devurl": "https://github.com/paullabonne/bayesmultimode",
  "_searchresults": 10,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/BayesMultiMode.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/paullabonne/bayesmultimode",
  "_realowner": "paullabonne",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.1",
      "date": "2022-10-12"
    },
    {
      "version": "0.5.1",
      "date": "2023-04-06"
    },
    {
      "version": "0.6.0",
      "date": "2023-08-08"
    },
    {
      "version": "0.7.0",
      "date": "2024-02-05"
    },
    {
      "version": "0.7.1",
      "date": "2024-03-21"
    },
    {
      "version": "0.7.2",
      "date": "2024-10-25"
    },
    {
      "version": "0.7.3",
      "date": "2024-10-31"
    },
    {
      "version": "0.7.4",
      "date": "2025-09-27"
    },
    {
      "version": "0.7.5",
      "date": "2026-02-27"
    }
  ],
  "_exports": [
    "bayes_fit",
    "bayes_mixture",
    "bayes_mode",
    "bayes_trace",
    "mix_mode",
    "mixture"
  ],
  "_datasets": [
    {
      "name": "ct47",
      "title": "X chromosomal macrosatellite repeats ct47",
      "object": "ct47",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "cyclone",
      "title": "Tropical cyclones lifetime maximum intensity",
      "object": "cyclone",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "SID",
        "max_wind",
        "BASIN",
        "SEASON"
      ],
      "rows": 7211,
      "table": true,
      "tojson": true
    },
    {
      "name": "d4z4",
      "title": "Autosomal macrosatellite repeats d4z4",
      "object": "d4z4",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "galaxy",
      "title": "Galaxy series",
      "object": "galaxy",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "bayes_fit",
      "title": "Bayesian estimation of mixture distributions",
      "topics": [
        "bayes_fit"
      ]
    },
    {
      "page": "bayes_mixture",
      "title": "Creating a S3 object of class 'bayes_mixture'",
      "topics": [
        "bayes_mixture"
      ]
    },
    {
      "page": "bayes_mode",
      "title": "Bayesian mode inference",
      "topics": [
        "bayes_mode"
      ]
    },
    {
      "page": "bayes_trace",
      "title": "Trace plots",
      "topics": [
        "bayes_trace"
      ]
    },
    {
      "page": "ct47",
      "title": "X chromosomal macrosatellite repeats ct47",
      "topics": [
        "ct47"
      ]
    },
    {
      "page": "cyclone",
      "title": "Tropical cyclones lifetime maximum intensity",
      "topics": [
        "cyclone"
      ]
    },
    {
      "page": "d4z4",
      "title": "Autosomal macrosatellite repeats d4z4",
      "topics": [
        "d4z4"
      ]
    },
    {
      "page": "galaxy",
      "title": "Galaxy series",
      "topics": [
        "galaxy"
      ]
    },
    {
      "page": "mix_mode",
      "title": "Mode estimation",
      "topics": [
        "mix_mode"
      ]
    },
    {
      "page": "mixture",
      "title": "Creating a S3 object of class 'mixture'",
      "topics": [
        "mixture"
      ]
    },
    {
      "page": "plot.bayes_mixture",
      "title": "Plot method for 'bayes_mixture' objects",
      "topics": [
        "plot.bayes_mixture"
      ]
    },
    {
      "page": "plot.bayes_mode",
      "title": "Plot method for 'bayes_mode' objects",
      "topics": [
        "plot.bayes_mode"
      ]
    },
    {
      "page": "plot.mix_mode",
      "title": "Plot method for 'mix_mode' objects",
      "topics": [
        "plot.mix_mode"
      ]
    },
    {
      "page": "plot.Mixture",
      "title": "Plot method for 'mixture' objects",
      "topics": [
        "plot.mixture"
      ]
    },
    {
      "page": "print.bayes_mixture",
      "title": "Print method for 'bayes_mixture' objects",
      "topics": [
        "print.bayes_mixture"
      ]
    },
    {
      "page": "print.bayes_mode",
      "title": "Print method for 'bayes_mode' objects",
      "topics": [
        "print.bayes_mode"
      ]
    },
    {
      "page": "print.mix_mode",
      "title": "Print method for 'mix_mode' objects",
      "topics": [
        "print.mix_mode"
      ]
    },
    {
      "page": "print.Mixture",
      "title": "Print method for 'mixture' objects",
      "topics": [
        "print.mixture"
      ]
    },
    {
      "page": "summary.bayes_mixture",
      "title": "Summary method for 'bayes_mixture' objects The summary of MCMC draws is given by the function 'summarise_draws' from package 'posterior'.",
      "topics": [
        "summary.bayes_mixture"
      ]
    },
    {
      "page": "summary.bayes_mode",
      "title": "Summary method for 'bayes_mode' objects",
      "topics": [
        "summary.bayes_mode"
      ]
    },
    {
      "page": "summary.mix_mode",
      "title": "Summary method for 'mix_mode' objects",
      "topics": [
        "summary.mix_mode"
      ]
    },
    {
      "page": "summary.Mixture",
      "title": "Summary method for 'mixture' objects",
      "topics": [
        "summary.mixture"
      ]
    }
  ],
  "_readme": "https://github.com/paullabonne/bayesmultimode/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "ape",
    "assertthat",
    "backports",
    "bayesplot",
    "boot",
    "broom",
    "car",
    "carData",
    "checkmate",
    "cli",
    "coda",
    "colorspace",
    "corpcor",
    "corrplot",
    "cowplot",
    "cpp11",
    "cubature",
    "Deriv",
    "digest",
    "distributional",
    "doBy",
    "dplyr",
    "farver",
    "forecast",
    "Formula",
    "fracdiff",
    "generics",
    "ggplot2",
    "ggpubr",
    "ggrepel",
    "ggridges",
    "ggsci",
    "ggsignif",
    "glue",
    "gridExtra",
    "gtable",
    "gtools",
    "isoband",
    "labeling",
    "lattice",
    "lifecycle",
    "lme4",
    "lmtest",
    "magrittr",
    "MASS",
    "Matrix",
    "MatrixModels",
    "matrixStats",
    "MCMCglmm",
    "mgcv",
    "microbenchmark",
    "minqa",
    "mnormt",
    "modelr",
    "mvtnorm",
    "nlme",
    "nloptr",
    "nnet",
    "numDeriv",
    "pbkrtest",
    "pillar",
    "pkgconfig",
    "plyr",
    "polynom",
    "posterior",
    "purrr",
    "quantreg",
    "R6",
    "rbibutils",
    "RColorBrewer",
    "Rcpp",
    "RcppArmadillo",
    "RcppEigen",
    "Rdpack",
    "reformulas",
    "reshape2",
    "rlang",
    "rstatix",
    "S7",
    "scales",
    "sn",
    "SparseM",
    "stringi",
    "stringr",
    "survival",
    "tensorA",
    "tibble",
    "tidyr",
    "tidyselect",
    "timeDate",
    "urca",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr",
    "zoo"
  ],
  "_score": 3.6020599913279625,
  "_indexed": true,
  "_nocasepkg": "bayesmultimode",
  "_universes": [
    "paullabonne"
  ],
  "_previous": "0.7.5",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.0",
      "date": "2026-05-31T23:24:22.000Z",
      "distro": "noble",
      "commit": "68841192e427c7270049a53d703837f2128a155f",
      "fileid": "78573e40cc50345825565d290c7c1a2f8f9ba5121a5adbbe63a52566f6d883cd",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/paullabonne/actions/runs/26727369261"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.0",
      "date": "2026-05-31T23:24:33.000Z",
      "distro": "noble",
      "commit": "68841192e427c7270049a53d703837f2128a155f",
      "fileid": "bc0b625bd37c2e41be43f7be58ce0b0b24d97d18ee38d66c3f0d5ab80cc6d281",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/paullabonne/actions/runs/26727369261"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.0",
      "date": "2026-05-31T23:23:27.000Z",
      "commit": "68841192e427c7270049a53d703837f2128a155f",
      "fileid": "a9ec3102bfaad3d8a129ad23140612f5cd65d1849605dad901d4bb33a5c20bc1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/paullabonne/actions/runs/26727369261"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0.0",
      "date": "2026-05-31T23:23:42.000Z",
      "commit": "68841192e427c7270049a53d703837f2128a155f",
      "fileid": "f764091e72fd83f32e3384b88071193ac497b8a5a7a16e671a2919e3c23e2213",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/paullabonne/actions/runs/26727369261"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.0",
      "date": "2026-05-31T23:24:26.000Z",
      "commit": "68841192e427c7270049a53d703837f2128a155f",
      "fileid": "f2cddc8869dca986686b8f3a02063d956935e734f42ce1757c17eb7ec78379cb",
      "status": "success",
      "buildurl": "https://github.com/r-universe/paullabonne/actions/runs/26727369261"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.0",
      "date": "2026-05-31T23:24:51.000Z",
      "commit": "68841192e427c7270049a53d703837f2128a155f",
      "fileid": "84495d0c188b6804cc7f29b9af0257511b090bcb8172128df2da4df11757bd49",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/paullabonne/actions/runs/26727369261"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.0",
      "date": "2026-05-31T23:23:04.000Z",
      "commit": "68841192e427c7270049a53d703837f2128a155f",
      "fileid": "3ea31af51b464e60e0476bc13fc1000cb085efd820629b925262533357071634",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/paullabonne/actions/runs/26727369261"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.0.0",
      "date": "2026-05-31T23:23:25.000Z",
      "commit": "68841192e427c7270049a53d703837f2128a155f",
      "fileid": "27d24505491755d3b6ee6069a062c558fde9bf11ad28a3d10a3b4f295e2a76dc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/paullabonne/actions/runs/26727369261"
    }
  ]
}